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Conformational response to charge clustering in synthetic intrinsically disordered proteins.

Biochim Biophys Acta Gen Subj. 2018-07; 
TedeschiGiulia,SalladiniEdoardo,SantambrogioCarlo,GrandoriRita,LonghiSonia,BroccaStef
Products/Services Used Details Operation
Gene Synthesis … Synthetic genes optimized for expression in Escherichia coli and encoding the κ variants were obtained through gene synthesis (Genscript, Piscataway, NJ, USA), and were cloned into the pET-21a vector (EMD, Millipore, Billerica, MA, USA), between the NdeI and XhoI sites … Get A Quote

摘要

Recent theoretical and computational studies have shown that the charge content and, most importantly, the linear distribution of opposite charges are major determinants of conformational properties of intrinsically disordered proteins (IDPs). Charge segregation in a sequence can be measured through κ, which represents a normalized measure of charge asymmetry. A strong inverse correlation between κ and radius of gyration has been previously demonstrated for two independent sets of permutated IDP sequences.

关键词

Charge distribution, Proline content,Compaction index,Compaction responsiveness to κ,IDPs,Small-angle X-ray scatte